CDS

Accession Number TCMCG057C39471
gbkey CDS
Protein Id XP_018442764.1
Location complement(join(5851926..5852020,5852114..5852189,5852272..5852370,5852461..5852594,5852831..5852979,5853057..5853123,5853250..5853366,5853573..5853723,5853832..5853885,5854029..5854058))
Gene LOC108814653
GeneID 108814653
Organism Raphanus sativus

Protein

Length 323aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018587262.1
Definition PREDICTED: geranylgeranyl transferase type-2 subunit beta 1 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Geranylgeranyl transferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K05956        [VIEW IN KEGG]
EC 2.5.1.60        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0004661        [VIEW IN EMBL-EBI]
GO:0004663        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005968        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007600        [VIEW IN EMBL-EBI]
GO:0007601        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0008318        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0018342        [VIEW IN EMBL-EBI]
GO:0018344        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043687        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050877        [VIEW IN EMBL-EBI]
GO:0050953        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097354        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCTCTTCGTCTTCCTCGTCCTCCCAGATGGGTGAGCTTGTAGCTGACAAGCATGTACGTTACATTCTTATGTCAGAAAAGAAGAAAGAGAGTTTTGAGTCGGTGGTGATGGATCATCTCAGGATGAATGGTGCCTACTGGGGACTCACCACTCTAGACTTACTCGACAAGCTTCCCTCTGTTTCCGTTGATGAAGTCGTTTCATGGCTCTTGACCTGCCAGCACGAATCTGGTGGCTTTGCCGGAAATACTGGACATGACCCCCATGTTTTATATACACTGAGTGCTGTACAAATCTTGGCCCTCTTTGACAAACTAGACATTCTTGACGTTGCAAAAGTATCAAGCTATATTGCTGGTTTGCAGAACGAAGATGGATCCTTCTCTGGAGATATGTGGGGCGAAGTAGACACGAGGTTTTCCTACATTGCCATATGCTCTCTCTCAATTTTGAAATGTCTTGACAAAATCAATGTAGAGAAGGCCGTTGATTACATTGTTAGCTGCAAAAACCTTGATGGTGGTTTTGGGTGCACACCCGGAGCAGAATCACATGCAGGACAGATTTTCTGTTGCGTGGGTGCTCTTGCTATCACCGGGAGTCTCCATCATGTCGATAAGGACTTACTCGGGTGGTGGTTATGTGAAAGACAAGTCAAGTCAGGGGGTTTAAATGGACGACCCGAGAAACTTCCTGATGTTTGCTATTCTTGGTGGGTCCTATCTAGCCTAATCATGATAGATAGAGTTCACTGGATCAACAAAGCAAAGCTTGTCAAATTCATCTTGGATTGTCAGGATTTGGAGAACGGAGGTATCTCAGACAGACCTGACGATGCTGTTGATATCTTCCACACCTACTTTGGAGTTGCAGGGCTATCCCTCCTTGAGTATCCTGGAGTCAAAGCAATTGATCCAGCCTACGCTTTGCCTGTTGATGTCATCAATCGAATTCTCCTAACCAAATGA
Protein:  
MSSSSSSSSQMGELVADKHVRYILMSEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLPSVSVDEVVSWLLTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQNEDGSFSGDMWGEVDTRFSYIAICSLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVKAIDPAYALPVDVINRILLTK